STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67226.1KEGG: abu:Abu_2244 DegT/DnrJ/EryC1/StrS aminotransferase; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4- aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Belongs to the DegT/DnrJ/EryC1 family. (389 aa)    
Predicted Functional Partners:
ADD67225.1
UDP-N-acetylglucosamine 4,6-dehydratase; KEGG: abu:Abu_2243 UDP GlcNAc dehydratase/reductase PseB, putative; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: polysaccharide biosynthesis protein CapD; 3- beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; NAD- dependent epimerase/dehydratase.
 
 0.999
ADD67224.1
Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-like protein; KEGG: wsu:WS2107 hypothetical protein.
 
  
 0.856
ADD69053.1
PFAM: oxidoreductase domain protein; KEGG: noc:Noc_1755 oxidoreductase.
  
 0.769
ADD69516.1
KEGG: sat:SYN_02866 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.735
ADD69271.1
TIGRFAM: sugar O-acyltransferase, sialic acid O- acetyltransferase NeuD family; KEGG: avn:Avin_30060 trimeric LpxA-like family protein.
  
 0.733
ADD67246.1
PFAM: acylneuraminate cytidylyltransferase; KEGG: rpf:Rpic12D_0583 acylneuraminate cytidylyltransferase.
 
  
 0.728
ADD67420.1
TIGRFAM: pseudaminic acid synthase; KEGG: abu:Abu_2246 N-acetylneuraminic acid synthetase; PFAM: N-acetylneuraminic acid synthase domain.
 
  
 0.687
ADD67237.1
PFAM: Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: sun:SUN_1275 mannose-1-phosphate guanylyltransferase.
  
  
 0.676
ADD69169.1
TIGRFAM: KpsF/GutQ family protein; KEGG: cjd:JJD26997_1778 arabinose-5-phosphate isomerase; PFAM: sugar isomerase (SIS).
  
  
 0.561
ADD69440.1
KEGG: cjd:JJD26997_1806 putative nucleotidyltransferase.
  
  
 0.505
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.