Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67247.1PFAM: LmbE family protein; KEGG: cla:Cla_1324 LmbE-like protein. (232 aa)    
Predicted Functional Partners:
ADD67246.1
PFAM: acylneuraminate cytidylyltransferase; KEGG: rpf:Rpic12D_0583 acylneuraminate cytidylyltransferase.
 
     0.824
ADD67248.1
N-acylneuraminate-9-phosphate synthase; KEGG: lpn:lpg0752 N-acetylneuraminic acid synthetase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein.
  
  
 0.798
ADD67252.1
PFAM: WbqC-like family protein; KEGG: mmw:Mmwyl1_0831 WbqC-like family protein.
 
     0.693
ADD69534.1
PFAM: WbqC-like family protein; KEGG: mmw:Mmwyl1_0831 WbqC-like family protein.
 
     0.587
ADD67224.1
Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-like protein; KEGG: wsu:WS2107 hypothetical protein.
 
    0.529
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.493
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
  
 0.470
ADD68298.1
Polynucleotide adenylyltransferase region; KEGG: gur:Gura_2246 CBS domain-containing protein; PFAM: Polynucleotide adenylyltransferase region; phosphoesterase DHHA1; CBS domain containing protein; phosphoesterase RecJ domain protein; SMART: CBS domain containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.468
ADD67249.1
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
       0.458
cysS
KEGG: gme:Gmet_0057 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.444
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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