Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67256.1PFAM: Radical SAM domain protein; KEGG: dma:DMR_24580 hypothetical protein. (378 aa)    
Predicted Functional Partners:
ADD67252.1
PFAM: WbqC-like family protein; KEGG: mmw:Mmwyl1_0831 WbqC-like family protein.
 
     0.812
ADD67254.1
PFAM: Methyltransferase type 11; methyltransferase small; Methyltransferase type 12; KEGG: similar to AGAP010537-PA.
       0.775
ADD67255.1
PFAM: GCN5-related N-acetyltransferase; KEGG: vvy:VV0304 TDP-fucosamine acetyltransferase.
  
    0.775
ADD67253.1
PFAM: amidohydrolase 2; KEGG: dat:HRM2_10900 putative metal-dependent hydrolase.
       0.773
ADD67466.1
KEGG: glo:Glov_3057 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
 
  
 0.503
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
     
 0.448
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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