Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67286.1PFAM: Abortive infection protein; KEGG: tgr:Tgr7_0273 abortive infection protein. (135 aa)    
Predicted Functional Partners:
ADD67287.1
Type II secretory pathway component PulC-like protein; KEGG: dal:Dalk_5148 PDZ/DHR/GLGF domain-containing protein.
 
     0.743
ADD67288.1
KEGG: dat:HRM2_11310 GspD1; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein.
 
     0.725
ADD67290.1
PFAM: Type II secretion system F domain; KEGG: sdn:Sden_0123 general secretion pathway protein F.
     
 0.687
ADD67289.1
Type II secretion system protein E; KEGG: cti:RALTA_A2997 general secretory pathway E protein, ATPase component; PFAM: type II secretion system protein E; SMART: AAA ATPase.
       0.684
ADD67281.1
Hypothetical protein; KEGG: glo:Glov_1274 general secretion pathway protein K.
 
     0.619
ADD67285.1
KEGG: aeh:Mlg_2391 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G.
       0.566
ADD67283.1
Hypothetical protein; KEGG: pin:Ping_3118 type IV pilin.
       0.564
ADD67284.1
Hypothetical protein; KEGG: sbl:Sbal_3828 methylation site containing protein.
       0.564
ADD67279.1
KEGG: dat:HRM2_11340 hypothetical protein.
       0.563
ADD67280.1
Hypothetical protein.
       0.563
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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