Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
vapCPilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (133 aa)    
Predicted Functional Partners:
ADD67339.1
KEGG: dal:Dalk_1529 SpoVT/AbrB domain protein.
 
 
 0.996
ADD67337.1
KEGG: swd:Swoo_0133 hypothetical protein.
       0.773
ADD67422.1
KEGG: gur:Gura_4388 helix-turn-helix domain- containing protein; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein.
 
  
 0.537
ADD67400.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
   
 0.470
ADD67340.1
PFAM: HipA domain protein; KEGG: sun:SUN_1608 hypothetical protein.
     
 0.433
ADD67401.1
Addiction module toxin, RelE/StbE family; KEGG: lhk:LHK_01762 plasmid stabilization system; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system.
 
   
 0.423
ADD67341.1
PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: abu:Abu_1483 putative transcriptional regulator.
       0.404
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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