Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67385.1TIGRFAM: type-F conjugative transfer system pilin assembly protein TrbC; PFAM: Type-F conjugative transfer system pilin assembly protein TrbC; KEGG: ppd:Ppro_3771 hypothetical protein. (244 aa)    
Predicted Functional Partners:
ADD67386.1
KEGG: glo:Glov_0308 type IV secretory protease.
     
 0.778
ADD67381.1
KEGG: sat:SYN_01892 putative cytoplasmic protein.
       0.773
ADD67382.1
KEGG: sat:SYN_01891 hypothetical protein.
       0.773
ADD67383.1
KEGG: glo:Glov_0307 hypothetical protein.
       0.773
ADD67384.1
KEGG: glo:Glov_0315 hypothetical protein.
       0.773
ADD67387.1
KEGG: sat:SYN_01867 hypothetical protein; PFAM: proteinase inhibitor I2 Kunitz metazoa; SMART: Worm-specific repeat type 1.
       0.773
ADD67388.1
PFAM: membrane-bound metal-dependent hydrolase; metal-dependent phosphohydrolase HD sub domain; KEGG: sat:SYN_01887 metal dependent phosphohydrolases.
       0.773
ADD67389.1
KEGG: sat:SYN_01886 DNA transfer in the process of conjugation and F pilus assembly protein.
       0.773
ADD67282.1
Hypothetical protein; KEGG: pap:PSPA7_2035 general secretion pathway protein J.
  
 
 0.742
ADD67281.1
Hypothetical protein; KEGG: glo:Glov_1274 general secretion pathway protein K.
  
 
 0.716
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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