STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67387.1KEGG: sat:SYN_01867 hypothetical protein; PFAM: proteinase inhibitor I2 Kunitz metazoa; SMART: Worm-specific repeat type 1. (1101 aa)    
Predicted Functional Partners:
ADD67389.1
KEGG: sat:SYN_01886 DNA transfer in the process of conjugation and F pilus assembly protein.
 
    0.947
ADD67358.1
PFAM: TraU family protein; KEGG: sat:SYN_01869 conjugal DNA transfer protein.
 
   
 0.789
ADD67355.1
KEGG: glo:Glov_0316 sex pilus assembly protein.
 
   
 0.783
ADD67363.1
PFAM: TraH family protein; KEGG: sat:SYN_01874 pilus assembly protein.
 
   
 0.781
ADD67353.1
PFAM: TraB pilus assembly family protein; KEGG: sat:SYN_01863 pilus assembly protein.
 
     0.779
ADD67359.1
Glutaredoxin 2; KEGG: ppd:Ppro_0197 glutaredoxin 2.
 
     0.778
ADD67386.1
KEGG: glo:Glov_0308 type IV secretory protease.
       0.778
ADD67357.1
KEGG: sat:SYN_01868 putative cytoplasmic protein.
  
     0.775
ADD67384.1
KEGG: glo:Glov_0315 hypothetical protein.
       0.775
ADD67381.1
KEGG: sat:SYN_01892 putative cytoplasmic protein.
       0.773
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.