Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67397.1ATPase; KEGG: ppd:Ppro_0262 ATPase. (429 aa)    
Predicted Functional Partners:
ADD67426.1
ATPase; KEGG: rbo:A1I_03895 ATPase.
  
     0.774
ADD69310.1
SMART: AAA ATPase; KEGG: gur:Gura_4144 AAA ATPase.
  
     0.769
ADD67399.1
KEGG: gsu:GSU1367 hypothetical protein.
 
     0.666
ADD67398.1
PFAM: Domain of unknown function DUF1814; KEGG: gsu:GSU1368 hypothetical protein.
 
     0.606
ADD67485.1
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: hso:HS_0100 transcriptional regulator.
 
     0.562
ADD67396.1
KEGG: sdn:Sden_2807 hypothetical protein.
       0.558
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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