Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADD67422.1KEGG: gur:Gura_4388 helix-turn-helix domain- containing protein; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein. (351 aa)    
Predicted Functional Partners:
ADD67423.1
KEGG: gur:Gura_4387 hypothetical protein.
       0.773
ADD67340.1
PFAM: HipA domain protein; KEGG: sun:SUN_1608 hypothetical protein.
   
 
 0.763
ADD67847.1
TIGRFAM: HipA N-terminal domain protein; KEGG: lpf:lpl2291 hypothetical protein.
   
 
 0.763
ADD69407.1
KEGG: glo:Glov_2897 HipA N-terminal domain protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein.
   
 
 0.763
ADD69412.1
PFAM: HipA domain protein; KEGG: dol:Dole_2637 HipA domain-containing protein.
   
 
 0.763
ADD67930.1
KEGG: gem:GM21_2320 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein.
  
  
 0.595
ADD68276.1
Transcriptional regulator, XRE family; KEGG: aha:AHA_0244 DNA-binding protein; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
  
 0.595
ADD67717.1
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: ret:RHE_PE00434 Cro/CI family transcriptional regulator.
  
  
 0.594
ADD68202.1
KEGG: bur:Bcep18194_A5003 XRE family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
  
 0.539
vapC
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
  
 0.537
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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