Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ADD67452.1KEGG: abu:Abu_1483 putative transcriptional regulator. (104 aa)    
Predicted Functional Partners:
ADD67340.1
PFAM: HipA domain protein; KEGG: sun:SUN_1608 hypothetical protein.
 
  
 0.781
ADD69412.1
PFAM: HipA domain protein; KEGG: dol:Dole_2637 HipA domain-containing protein.
 
  
 0.767
ADD69411.1
Transcriptional regulator, XRE family; KEGG: vvu:VV1_2191 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.681
ADD67453.1
KEGG: sat:SYN_01836 MreB-like ATPase involved in cell division.
 
   
 0.568
ADD69310.1
SMART: AAA ATPase; KEGG: gur:Gura_4144 AAA ATPase.
  
     0.560
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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