Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADD67462.1KEGG: glo:Glov_1295 hypothetical protein. (475 aa)    
Predicted Functional Partners:
ADD67463.1
KEGG: glo:Glov_1291 hypothetical protein.
       0.768
ADD67464.1
PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: dvm:DvMF_1612 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family.
       0.731
ADD67465.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: asu:Asuc_1522 dimethylsulfoxide reductase chain B.
       0.672
ADD67466.1
KEGG: glo:Glov_3057 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.514
ADD67467.1
Hypothetical protein.
       0.514
ADD67468.1
PFAM: cytoplasmic chaperone TorD family protein; KEGG: vha:VIBHAR_01582 chaperone protein TorD.
       0.439
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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