Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67485.1Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: hso:HS_0100 transcriptional regulator. (435 aa)    
Predicted Functional Partners:
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
    
 0.902
ADD68984.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: dps:DP1829 hypothetical protein.
 
     0.618
ADD69410.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: dol:Dole_0415 filamentation induced by cAMP protein Fic.
 
     0.606
ADD68976.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: dps:DP1829 hypothetical protein.
 
     0.601
ADD68956.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: dps:DP1829 hypothetical protein.
 
     0.594
ADD67486.1
PFAM: integrase family protein; KEGG: ppd:Ppro_1126 phage integrase family protein; Belongs to the 'phage' integrase family.
       0.580
ADD67487.1
Hypothetical protein.
       0.579
ADD67397.1
ATPase; KEGG: ppd:Ppro_0262 ATPase.
 
     0.562
ADD67846.1
ATPase; KEGG: ppd:Ppro_0262 ATPase.
 
     0.562
ADD67426.1
ATPase; KEGG: rbo:A1I_03895 ATPase.
 
     0.522
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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