Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADD67491.1PFAM: protein of unknown function DUF87; KEGG: pfs:PFLU0171 hypothetical protein. (594 aa)    
Predicted Functional Partners:
ADD67490.1
KEGG: psb:Psyr_0097 hypothetical protein.
 
 
   0.966
ADD67492.1
KEGG: psb:Psyr_0099 hypothetical protein.
 
     0.912
ADD67493.1
PFAM: NERD domain protein; KEGG: shn:Shewana3_0647 NERD domain-containing protein.
       0.438
ADD69367.1
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: azo:azo3846 putative molybdate transport system substrate-binding protein.
  
     0.434
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
   0.400
ADD68895.1
KEGG: dde:Dde_0493 hypothetical protein.
   
   0.400
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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