Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADD67526.1PFAM: protein of unknown function DUF752; KEGG: wsu:WS0458 hypothetical protein. (227 aa)    
Predicted Functional Partners:
ADD67527.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.817
ADD67529.1
PFAM: Radical SAM domain protein; KEGG: gem:GM21_0860 radical SAM domain protein.
  
    0.802
ADD67528.1
KEGG: gem:GM21_3782 hypothetical protein.
       0.800
mqnA
Protein of unknown function DUF178; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).
      0.775
ADD67530.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; KEGG: ppr:PBPRB0486 hypothetical protein; SMART: GGDEF domain containing protein; PAC repeat- containing protein.
       0.523
ADD67649.1
KEGG: nis:NIS_0533 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F.
 
     0.477
mnmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
   
 0.469
ADD69747.1
Putative phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; KEGG: nis:NIS_1147 phosphohistidine phosphatase.
  
    0.469
ADD66860.1
TIGRFAM: tRNA 2-selenouridine synthase; PFAM: Rhodanese domain protein; KEGG: ppd:Ppro_3539 tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein.
  
   
 0.414
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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