Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ADD67543.1PFAM: Integrase catalytic region; KEGG: rme:Rmet_1264 integrase catalytic subunit. (348 aa)    
Predicted Functional Partners:
ADD67542.1
KEGG: rme:Rmet_1263 transposase/IS protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
   0.979
ADD67069.1
KEGG: sat:SYN_01899 IstB-like ATP binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
   0.816
ADD67461.1
KEGG: sat:SYN_01899 IstB-like ATP binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
   0.816
ADD67496.1
KEGG: sat:SYN_01899 IstB-like ATP binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
   0.816
ADD67855.1
KEGG: sat:SYN_01899 IstB-like ATP binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
   0.816
ADD68240.1
KEGG: sat:SYN_01899 IstB-like ATP binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
   0.816
ADD68407.1
KEGG: sat:SYN_01899 IstB-like ATP binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
   0.816
ADD69572.1
KEGG: sat:SYN_01899 IstB-like ATP binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
   0.816
ADD67073.1
KEGG: maq:Maqu_2981 IstB ATP binding domain- containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
 
   0.461
ADD67500.1
KEGG: maq:Maqu_2981 IstB ATP binding domain- containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
 
   0.461
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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