Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67555.1KEGG: bav:BAV2490 MarR-family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR. (167 aa)    
Predicted Functional Partners:
ADD67556.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: psa:PST_2228 hypothetical protein.
     
 0.773
ADD67557.1
Integral membrane sensor signal transduction histidine kinase; KEGG: aha:AHA_2666 GGDEF domain-containing protein; PFAM: NMT1/THI5 like domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
       0.529
ADD67554.1
KEGG: dol:Dole_2711 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
   
   0.508
ADD67804.1
KEGG: abu:Abu_0136 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
     0.458
ADD68858.1
PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: bpy:Bphyt_5813 major facilitator superfamily MFS_1.
  
     0.414
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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