Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67557.1Integral membrane sensor signal transduction histidine kinase; KEGG: aha:AHA_2666 GGDEF domain-containing protein; PFAM: NMT1/THI5 like domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein. (599 aa)    
Predicted Functional Partners:
ADD69482.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: gbm:Gbem_1228 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein; response regulator receiver.
   
 0.924
ADD67531.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; KEGG: sse:Ssed_1934 hypothetical protein; SMART: GGDEF domain containing protein; PAC repeat- containing protein.
 
 
 0.921
ADD68607.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: dma:DMR_39180 response regulator receiver protein; SMART: GGDEF domain containing protein; response regulator receiver.
   
 0.921
ADD67922.1
Response regulator receiver modulated diguanylate cyclase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; response regulator receiver; PAS fold domain protein; KEGG: sse:Ssed_1934 hypothetical protein; SMART: GGDEF domain containing protein; response regulator receiver; PAS domain containing protein.
   
 0.912
ADD68821.1
Multi-sensor hybrid histidine kinase; KEGG: swp:swp_2315 PAS domain protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein.
 
 
 0.903
ADD69645.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: sfu:Sfum_2209 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein.
 
 
 0.903
ADD67591.1
Diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; KEGG: dde:Dde_0867 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein.
  
 
 0.902
ADD67530.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; KEGG: ppr:PBPRB0486 hypothetical protein; SMART: GGDEF domain containing protein; PAC repeat- containing protein.
 
 
 0.900
ADD68034.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mxa:MXAN_3705 GAF domain/GGDEF domain- containing protein; SMART: GGDEF domain containing protein.
 
    
 0.899
ADD68754.1
Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ppd:Ppro_0085 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein.
 
    
 0.897
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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