STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67562.1Efflux transporter, RND family, MFP subunit; KEGG: pca:Pcar_0668 Acr family membrane-fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (408 aa)    
Predicted Functional Partners:
ADD67563.1
PFAM: acriflavin resistance protein; KEGG: pca:Pcar_0669 AcrB/AcrD/AcrF family cation efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.975
ADD67561.1
KEGG: dat:HRM2_00920 putative outer membrane efflux protein (OprM-family protein); TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
 
 
 0.947
ADD66925.1
KEGG: dps:DP0512 outer membrane (agglutination) protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: OmpA/MotB domain protein; outer membrane efflux protein.
 
 
 0.774
ADD67523.1
PFAM: acriflavin resistance protein; KEGG: dde:Dde_0670 AcrB/AcrD/AcrF family transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.751
ADD67034.1
KEGG: dat:HRM2_15820 RND efflux pump (AcrB/AcrD/AcrF family protein); TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.735
ADD67560.1
PFAM: transposase IS4 family protein; KEGG: dal:Dalk_2298 transposase IS4 family protein.
       0.689
ADD67035.1
KEGG: dat:HRM2_15830 RND efflux transporter, outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
 
 
 0.660
ADD68378.1
KEGG: dde:Dde_2152 hypothetical protein.
  
  
 0.618
ADD68245.1
PFAM: outer membrane efflux protein; KEGG: pna:Pnap_4182 outer membrane efflux protein.
 
 
 0.595
ADD69496.1
PFAM: acriflavin resistance protein; KEGG: dde:Dde_1563 cation/multidrug efflux pump- like; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.591
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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