Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67571.1KEGG: gsu:GSU0616 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein. (296 aa)    
Predicted Functional Partners:
ADD67572.1
Formate-dependent nitrite reductase periplasmic cytochrome c552 subunit-like protein; KEGG: afw:Anae109_3110 hypothetical protein; Belongs to the cytochrome c-552 family.
 
 
 0.953
ADD67566.1
KEGG: ccv:CCV52592_0014 hypothetical protein.
 
   
 0.918
ADD67565.1
Hypothetical protein; KEGG: gme:Gmet_0100 cytochrome c family protein.
 
   
 0.917
ADD67568.1
PFAM: NHL repeat containing protein; KEGG: mca:MCA0433 NHL domain/cytochrome c family protein.
 
     0.903
ADD67265.1
KEGG: ppr:PBPRA1496 hypothetical trimethylamine N- oxide reductase,cytochrome c-type subunit.
  
     0.773
ADD67569.1
KEGG: gbm:Gbem_1124 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
 
    
0.769
ADD67574.1
KEGG: acp:A2cp1_3539 hypothetical protein.
  
 
 0.759
ADD67126.1
KEGG: dat:HRM2_31460 hypothetical protein.
  
     0.751
ADD68443.1
KEGG: slo:Shew_0515 hypothetical protein.
  
     0.731
ADD68866.1
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: eba:ebA5622 molybdenum enzyme, large subunit,related to phenylacetyl-CoA: acceptor oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   0.722
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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