Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67572.1Formate-dependent nitrite reductase periplasmic cytochrome c552 subunit-like protein; KEGG: afw:Anae109_3110 hypothetical protein; Belongs to the cytochrome c-552 family. (723 aa)    
Predicted Functional Partners:
ADD67571.1
KEGG: gsu:GSU0616 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
 
 
 0.953
ADD67569.1
KEGG: gbm:Gbem_1124 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
 
 
 0.951
ADD67565.1
Hypothetical protein; KEGG: gme:Gmet_0100 cytochrome c family protein.
 
   
 0.904
ADD67566.1
KEGG: ccv:CCV52592_0014 hypothetical protein.
 
   
 0.888
ADD67265.1
KEGG: ppr:PBPRA1496 hypothetical trimethylamine N- oxide reductase,cytochrome c-type subunit.
 
 
 0.878
ADD68559.1
PFAM: Polysulphide reductase NrfD; KEGG: cco:CCC13826_1874 polysulphide reductase, NrfD.
 
  
 0.799
ADD67568.1
PFAM: NHL repeat containing protein; KEGG: mca:MCA0433 NHL domain/cytochrome c family protein.
 
     0.787
ADD67126.1
KEGG: dat:HRM2_31460 hypothetical protein.
  
     0.745
ADD69609.1
KEGG: geo:Geob_2165 PBS lyase heat domain protein repeat-containing protein; PFAM: PBS lyase HEAT domain protein repeat- containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein.
  
     0.744
ADD69231.1
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
     0.743
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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