Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADD67573.1KEGG: gsu:GSU2739 hypothetical protein. (412 aa)    
Predicted Functional Partners:
ADD67572.1
Formate-dependent nitrite reductase periplasmic cytochrome c552 subunit-like protein; KEGG: afw:Anae109_3110 hypothetical protein; Belongs to the cytochrome c-552 family.
       0.718
ADD67575.1
Hypothetical protein; KEGG: gem:GM21_3540 domain of unknown function DUF1927.
       0.701
ADD67574.1
KEGG: acp:A2cp1_3539 hypothetical protein.
       0.691
ADD67571.1
KEGG: gsu:GSU0616 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
       0.672
ADD67566.1
KEGG: ccv:CCV52592_0014 hypothetical protein.
       0.578
ADD67567.1
KEGG: mca:MCA0432 putative lipoprotein.
       0.578
ADD67569.1
KEGG: gbm:Gbem_1124 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
       0.578
ADD67570.1
Hypothetical protein.
       0.578
ADD67568.1
PFAM: NHL repeat containing protein; KEGG: mca:MCA0433 NHL domain/cytochrome c family protein.
       0.574
ADD67565.1
Hypothetical protein; KEGG: gme:Gmet_0100 cytochrome c family protein.
       0.560
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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