Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67577.1KEGG: gme:Gmet_2899 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein. (333 aa)    
Predicted Functional Partners:
ADD67576.1
Hypothetical protein.
       0.773
ADD67565.1
Hypothetical protein; KEGG: gme:Gmet_0100 cytochrome c family protein.
 
  
 0.772
ADD67566.1
KEGG: ccv:CCV52592_0014 hypothetical protein.
 
  
 0.765
ADD67265.1
KEGG: ppr:PBPRA1496 hypothetical trimethylamine N- oxide reductase,cytochrome c-type subunit.
  
     0.718
ADD67572.1
Formate-dependent nitrite reductase periplasmic cytochrome c552 subunit-like protein; KEGG: afw:Anae109_3110 hypothetical protein; Belongs to the cytochrome c-552 family.
 
 
 0.644
ADD68443.1
KEGG: slo:Shew_0515 hypothetical protein.
  
     0.634
ADD67568.1
PFAM: NHL repeat containing protein; KEGG: mca:MCA0433 NHL domain/cytochrome c family protein.
 
     0.627
ADD68440.1
PFAM: Polysulphide reductase NrfD; KEGG: wsu:WS0707 molybdopterin oxidoreductase, membrane subunit.
 
     0.602
ADD67648.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dps:DP0873 hypothetical protein.
 
 
 0.552
ADD67574.1
KEGG: acp:A2cp1_3539 hypothetical protein.
  
 
 0.490
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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