Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
ADD67583.1KEGG: sfu:Sfum_0712 D-alanine--D-alanine ligase domain protein; PFAM: D-alanine--D-alanine ligase domain protein. (336 aa)    
Predicted Functional Partners:
ADD67584.1
PFAM: protein of unknown function DUF201; KEGG: dol:Dole_1891 GCN5-related N- acetyltransferase.
  
 
0.994
ADD67585.1
PFAM: GCN5-related N-acetyltransferase; KEGG: dol:Dole_1891 GCN5-related N- acetyltransferase.
     0.983
ADD67582.1
TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: sfu:Sfum_0711 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein.
     0.946
ADD68967.1
PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: mmb:Mmol_2008 UDP-N-acetylmuramoylalanyl-D- glutamyl-2,6-diaminopimelate/D-alanyl-D -alanyl ligase.
  
 
 0.940
ddl
D-alanine/D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
  
 
0.922
ADD68176.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.915
murD
UDP-N-acetylmuramoylalanine/D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
 
 0.909
ADD68960.1
Hypothetical protein; KEGG: nmn:NMCC_1719 cell division protein.
  
  
 0.686
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
  
  
 0.681
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
  
 0.665
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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