Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADD67596.1PFAM: protein of unknown function DUF155; KEGG: hch:HCH_06302 hypothetical protein. (257 aa)    
Predicted Functional Partners:
ADD67604.1
Flavodoxin-like protein; KEGG: kpe:KPK_5329 protoporphyrinogen oxidase.
 
     0.590
ADD67607.1
TIGRFAM: TonB family protein; KEGG: hch:HCH_06977 periplasmic protein TonB, links inner and outer membranes.
 
     0.513
ADD67126.1
KEGG: dat:HRM2_31460 hypothetical protein.
  
     0.497
ADD69473.1
Hypothetical protein; KEGG: dvl:Dvul_1151 heat repeat-containing PBS lyase.
  
     0.496
ADD67611.1
TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: dal:Dalk_0572 PAS/PAC sensor hybrid histidine kinase; SMART: PAS domain containing protein.
 
     0.487
ADD67597.1
PFAM: ABC-2 type transporter; KEGG: dal:Dalk_3535 ABC-2 type transporter.
       0.476
ADD67598.1
KEGG: ppd:Ppro_1263 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.476
ADD67599.1
KEGG: spe:Spro_3426 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.476
ADD67600.1
PFAM: transport system permease protein; KEGG: pol:Bpro_4778 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.476
ADD67601.1
PFAM: periplasmic binding protein; KEGG: scl:sce8314 putative periplasmic substrate- binding protein.
       0.470
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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