Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADD67620.1Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: azo:azo0736 nitrogen regulation protein NR(II); PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein. (319 aa)    
Predicted Functional Partners:
ADD68452.1
PFAM: nitrogen regulatory protein P-II; KEGG: pca:Pcar_1500 regulatory protein P-II for glutamine synthetase.
  
 0.979
ADD69009.1
PFAM: nitrogen regulatory protein P-II; KEGG: geo:Geob_1818 nitrogen regulatory protein P- II; Belongs to the P(II) protein family.
  
 0.979
ADD69088.1
KEGG: gme:Gmet_2563 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase.
  
 0.952
ADD69123.1
KEGG: gsu:GSU0598 sigma-54 dependent DNA-binding response regulator; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.871
ADD68489.1
KEGG: abu:Abu_0418 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.868
ADD69299.1
KEGG: dol:Dole_1938 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.824
ADD67621.1
KEGG: dat:HRM2_10830 MrcA; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase.
       0.816
ADD69617.1
KEGG: ppd:Ppro_0435 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.813
ADD68010.1
Response regulator receiver protein; KEGG: slo:Shew_2803 DNA-binding transcriptional regulator TorR; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.796
ADD69458.1
Response regulator receiver protein; KEGG: dal:Dalk_1576 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
 
 0.786
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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