Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADD67639.1KEGG: dal:Dalk_0295 CheC domain protein. (155 aa)    
Predicted Functional Partners:
ADD69602.1
KEGG: cjd:JJD26997_0603 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.942
ADD69474.1
KEGG: aha:AHA_1038 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver.
   
 0.933
ADD67515.1
KEGG: wsu:WS2113 hypothetical protein; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
 0.906
ADD66983.1
KEGG: dma:DMR_19040 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver.
   
 
  0.904
ADD69471.1
KEGG: lip:LI1142 CheY-like receiver; PFAM: response regulator receiver; SMART: response regulator receiver.
   
 
  0.904
ADD69051.1
KEGG: sat:SYN_00961 putative inhibitor of MCP methylation.
  
  
 
0.903
ADD68752.1
KEGG: abu:Abu_1358 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver.
    
  0.900
ADD69589.1
PFAM: protein of unknown function DUF342; KEGG: dde:Dde_1534 polymerase.
  
     0.693
ADD67210.1
PFAM: protein of unknown function DUF342; KEGG: dde:Dde_1534 polymerase.
  
     0.646
ADD68977.1
PFAM: protein of unknown function DUF342; KEGG: dde:Dde_1534 polymerase.
  
     0.621
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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