Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADD67642.1KEGG: hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat. (880 aa)    
Predicted Functional Partners:
ADD67640.1
PFAM: NAD-glutamate dehydrogenase; KEGG: csa:Csal_1340 glutamate dehydrogenase (NAD).
       0.773
ADD67641.1
PFAM: peptidase M16 domain protein; KEGG: bba:Bd3869 zinc protease; Belongs to the peptidase M16 family.
       0.773
ADD67206.1
SMART: DNA-directed DNA polymerase; Helix-hairpin- helix domain protein class 2; 5'-3' exonuclease; TIGRFAM: DNA polymerase I; KEGG: sfu:Sfum_1612 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain.
  
    0.571
ADD67639.1
KEGG: dal:Dalk_0295 CheC domain protein.
       0.563
ADD68031.1
PFAM: TM1410 hypothetical-related protein; KEGG: nmu:Nmul_A2438 hypothetical protein.
 
     0.522
ADD68513.1
KEGG: hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat.
  
     0.498
ADD69110.1
KEGG: sfu:Sfum_0556 peptidase C14, caspase catalytic subunit P20; PFAM: peptidase C14 caspase catalytic subunit p20; protein of unknown function DUF323; SMART: Peptidase C14, caspase precursor p45, core.
 
    0.453
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.419
ADD66873.1
KEGG: dal:Dalk_0133 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_3; SMART: Tetratricopeptide repeat.
  
     0.417
ADD67046.1
PFAM: protein of unknown function DUF262; KEGG: gbm:Gbem_2969 protein of unknown function DUF262.
  
     0.411
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.