STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67646.1PFAM: GCN5-related N-acetyltransferase; KEGG: pca:Pcar_1402 GNAT family acetyltransferase. (270 aa)    
Predicted Functional Partners:
ADD67647.1
TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: dps:DP2159 L-lysine 2,3-aminomutase; PFAM: Radical SAM domain protein.
  
 0.965
ADD67582.1
TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: sfu:Sfum_0711 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein.
  
 0.759
ADD67648.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dps:DP0873 hypothetical protein.
 
     0.579
argG
TIGRFAM: argininosuccinate synthase; KEGG: ara:Arad_4374 argininosuccinate synthase; PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.556
ADD68939.1
PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; KEGG: sat:SYN_02383 phosphoenolpyruvate synthase.
  
    0.508
ADD67774.1
PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; KEGG: sat:SYN_02383 phosphoenolpyruvate synthase.
  
    0.464
ADD68718.1
KEGG: rfr:Rfer_2360 hypothetical protein.
  
     0.413
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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