STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67648.1PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dps:DP0873 hypothetical protein. (314 aa)    
Predicted Functional Partners:
ADD68308.1
KEGG: gbm:Gbem_1236 cytochrome c oxidase, cbb3- type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c class I.
  
  
 0.835
ADD66894.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: msu:MS2280 quinol dehydrogenase periplasmic component.
 
 
 0.751
ADD67722.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS0920 iron-sulfur protein.
 
     0.591
ADD67993.1
PFAM: Polysulphide reductase NrfD; KEGG: glo:Glov_0146 putative hydrogenase 2 b cytochrome subunit.
  
     0.581
ADD67646.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pca:Pcar_1402 GNAT family acetyltransferase.
 
     0.579
ADD67566.1
KEGG: ccv:CCV52592_0014 hypothetical protein.
  
    0.576
ADD67719.1
KEGG: cff:CFF8240_0440 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II.
 
  
 0.563
ADD67571.1
KEGG: gsu:GSU0616 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
 
 
 0.556
ADD67577.1
KEGG: gme:Gmet_2899 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
 
 
 0.523
ADD67647.1
TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: dps:DP2159 L-lysine 2,3-aminomutase; PFAM: Radical SAM domain protein.
       0.515
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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