Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67648.1PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dps:DP0873 hypothetical protein. (314 aa)    
Predicted Functional Partners:
ADD68308.1
KEGG: gbm:Gbem_1236 cytochrome c oxidase, cbb3- type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c class I.
  
  
 0.783
ADD66894.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: msu:MS2280 quinol dehydrogenase periplasmic component.
 
 
 0.725
ADD67722.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS0920 iron-sulfur protein.
 
     0.593
ADD67719.1
KEGG: cff:CFF8240_0440 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II.
 
  
 0.588
ADD67993.1
PFAM: Polysulphide reductase NrfD; KEGG: glo:Glov_0146 putative hydrogenase 2 b cytochrome subunit.
  
   
 0.588
ADD67646.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pca:Pcar_1402 GNAT family acetyltransferase.
 
     0.579
ADD67566.1
KEGG: ccv:CCV52592_0014 hypothetical protein.
  
    0.575
ADD67577.1
KEGG: gme:Gmet_2899 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
 
 
 0.552
ADD67790.1
KEGG: dde:Dde_0300 hypothetical protein.
 
 
 0.531
ADD67571.1
KEGG: gsu:GSU0616 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
 
 
 0.526
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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