Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADD67681.1PFAM: protein of unknown function DUF339; KEGG: hypothetical protein. (103 aa)    
Predicted Functional Partners:
rpsG
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
   
   0.809
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
   0.797
ADD68737.1
KEGG: hypothetical protein; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap.
    
   0.764
ADD69258.1
PFAM: Ankyrin; KEGG: inversin protein alternative isoform.
    
 
 0.762
ADD67680.1
PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: pca:Pcar_1454 RNA-binding protein.
       0.693
ADD67044.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: gur:Gura_0801 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein.
  
 0.514
ADD67711.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: dal:Dalk_4443 succinate dehydrogenase.
  
 0.514
ADD68346.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; Twin-arginine translocation pathway, signal sequence; KEGG: acp:A2cp1_3684 fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
 0.514
ADD68350.1
KEGG: ank:AnaeK_1781 hypothetical protein.
  
 0.514
ADD68716.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; Twin-arginine translocation pathway, signal sequence; KEGG: shm:Shewmr7_2787 twin-arginine translocation pathway signal.
  
 0.514
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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