Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADD67686.1PFAM: OmpA/MotB domain protein; OmpA domain protein transmembrane region-containing protein; Thrombospondin type 3 repeat; OmpF family protein; KEGG: gsu:GSU0360 OmpA domain-containing protein. (368 aa)    
Predicted Functional Partners:
ADD69057.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: pca:Pcar_1252 outer membrane protein.
  
 
 0.749
ADD69078.1
KEGG: bba:Bd3406 flagellar basal-body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.727
ADD67089.1
Fagellar hook-basal body protein; KEGG: nam:NAMH_1447 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein.
   
 
 0.695
ADD67865.1
KEGG: ccv:CCV52592_0104 flagellar basal body rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein.
   
 
 0.695
ADD69168.1
KEGG: pca:Pcar_2042 membrane-bound lytic murein transglycosylase D precursor; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
 
 
 0.599
ADD67687.1
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pag:PLES_00661 putative phosphatase.
  
    0.578
ADD69076.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
   
 
 0.562
ADD67091.1
PFAM: OmpA/MotB domain protein; KEGG: nam:NAMH_1161 OmpA/MotB.
  
 
0.533
ADD69364.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: reu:Reut_A3204 endonuclease/exonuclease/phosphatase.
   
  
 0.513
ADD67937.1
PFAM: protein of unknown function DUF214; KEGG: tdn:Suden_1316 hypothetical protein.
  
 
 
 0.505
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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