Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67695.1KEGG: glo:Glov_3670 TonB-system energizer ExbB; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel. (144 aa)    
Predicted Functional Partners:
ADD67694.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hsm:HSM_1101 TonB system transport protein ExbD type-2.
 
 
 0.976
ADD67693.1
KEGG: gur:Gura_0773 TonB family protein; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein.
 
 
 0.913
ADD67608.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dat:HRM2_00050 ExbD.
 
 
 0.808
ADD67875.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dde:Dde_2155 biopolymer transport protein (ExbD2).
 
 
 0.796
ADD68363.1
KEGG: mmw:Mmwyl1_4086 TonB family protein; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein.
 
 
 0.705
ADD67746.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pha:PSHAb0523 putative TonB system-dependent transport protein.
 
 
 0.698
ADD68375.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dde:Dde_2155 biopolymer transport protein (ExbD2).
 
 
 0.696
ADD69058.1
KEGG: gbm:Gbem_0839 outer membrane protein assembly complex, YaeT protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein.
  
   
 0.644
ADD67696.1
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: dds:Ddes_0993 TonB-dependent receptor.
 
  
 0.636
ADD68470.1
TonB family protein; KEGG: pca:Pcar_2541 periplasmic protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein.
 
 
 0.601
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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