STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67715.1KEGG: gbm:Gbem_3374 hypothetical protein. (208 aa)    
Predicted Functional Partners:
ADD67713.1
KEGG: gbm:Gbem_3372 hypothetical protein.
       0.773
ADD67714.1
KEGG: gbm:Gbem_3373 cytochrome c family protein.
       0.773
ADD67716.1
KEGG: gem:GM21_0426 dinitrogenase iron-molybdenum cofactor biosynthesis protein.
       0.737
ADD67712.1
KEGG: nis:NIS_0010 succinate dehydrogenase/fumarate reductase, iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin.
       0.522
ADD67711.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: dal:Dalk_4443 succinate dehydrogenase.
       0.473
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.