Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67716.1KEGG: gem:GM21_0426 dinitrogenase iron-molybdenum cofactor biosynthesis protein. (120 aa)    
Predicted Functional Partners:
ADD67713.1
KEGG: gbm:Gbem_3372 hypothetical protein.
       0.737
ADD67714.1
KEGG: gbm:Gbem_3373 cytochrome c family protein.
       0.737
ADD67715.1
KEGG: gbm:Gbem_3374 hypothetical protein.
       0.737
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.522
ADD67712.1
KEGG: nis:NIS_0010 succinate dehydrogenase/fumarate reductase, iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin.
       0.499
ADD67261.1
KEGG: dma:DMR_42140 hypothetical protein.
  
     0.455
ADD67711.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: dal:Dalk_4443 succinate dehydrogenase.
       0.454
ADD67939.1
KEGG: glo:Glov_1547 extracellular solute-binding protein family 1.
 
  
 0.431
ADD68404.1
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    0.418
ADD68403.1
KEGG: dat:HRM2_09850 ModA4; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1.
 
  
 0.404
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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