Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67722.1PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS0920 iron-sulfur protein. (227 aa)    
Predicted Functional Partners:
ADD68457.1
KEGG: pca:Pcar_0377 NifJ-like oxidoreductase, Fe-S subunit; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain.
  
 
 0.983
ADD68757.1
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; KEGG: ppd:Ppro_0549 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.953
ADD67725.1
TIGRFAM: ferredoxin-type protein, NapH/MauN family; KEGG: sun:SUN_2173 NapH/MauN family ferredoxin-type protein.
 
     0.947
ADD67720.1
KEGG: wsu:WS0918 hypothetical protein.
 
     0.932
ADD67721.1
SMART: Parallel beta-helix repeat; KEGG: cff:CFF8240_0442 nitrous oxidase accessory protein.
 
     0.929
ADD67728.1
KEGG: nis:NIS_1780 ABC transporter, permease.
 
     0.922
ADD67727.1
KEGG: tdn:Suden_1313 hypothetical protein.
 
     0.906
ADD67726.1
KEGG: wsu:WS0924 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.882
ADD67719.1
KEGG: cff:CFF8240_0440 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II.
 
     0.841
ADD67723.1
KEGG: cff:CFF8240_0444 hypothetical protein.
     
 0.775
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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