STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67726.1KEGG: wsu:WS0924 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (212 aa)    
Predicted Functional Partners:
ADD67721.1
SMART: Parallel beta-helix repeat; KEGG: cff:CFF8240_0442 nitrous oxidase accessory protein.
     0.964
ADD68907.1
ABC-3 protein; KEGG: dat:HRM2_34160 putative ABC-type manganese/zinc transport system, permease component; PFAM: ABC-3 protein; iron dependent repressor; transport system permease protein; SMART: iron dependent repressor.
  
 
 0.963
ADD67720.1
KEGG: wsu:WS0918 hypothetical protein.
     0.939
ADD67728.1
KEGG: nis:NIS_1780 ABC transporter, permease.
 
     0.917
ADD67725.1
TIGRFAM: ferredoxin-type protein, NapH/MauN family; KEGG: sun:SUN_2173 NapH/MauN family ferredoxin-type protein.
 
     0.906
ADD67722.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS0920 iron-sulfur protein.
 
     0.882
ADD67727.1
KEGG: tdn:Suden_1313 hypothetical protein.
 
     0.876
ADD69724.1
PFAM: ABC-3 protein; KEGG: cff:CFF8240_1727 cation ABC transporter, permease protein.
  
 
 0.847
ADD67719.1
KEGG: cff:CFF8240_0440 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II.
 
     0.815
ADD67936.1
KEGG: tdn:Suden_1315 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.778
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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