Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67731.1KEGG: similar to GA12617-PA; TIGRFAM: conserved hypothetical protein; PFAM: Conserved hypothetical CHP02185 integral membrane family protein. (204 aa)    
Predicted Functional Partners:
ADD67732.1
PFAM: cobalt transport protein; KEGG: ppr:PBPRA2241 putative ABC transporter, membrane-spanning permease.
 
     0.947
ADD67733.1
KEGG: hha:Hhal_0379 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.947
ADD67734.1
KEGG: dde:Dde_1602 ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
     0.929
ADD67735.1
KEGG: pmr:PMI2604 siderophore ABC transporter, ATP- binding/permease protein; PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase.
 
     0.922
ADD67730.1
KEGG: cha:CHAB381_0626 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
 
    0.887
ADD68370.1
KEGG: wsu:WS1264 ABC transporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
     0.634
ADD68369.1
KEGG: wsu:WS1265 ABC transporter ATP- binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
     0.496
ADD67044.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: gur:Gura_0801 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein.
  
     0.444
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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