Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
ADD67733.1KEGG: hha:Hhal_0379 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (484 aa)    
Predicted Functional Partners:
ADD67732.1
PFAM: cobalt transport protein; KEGG: ppr:PBPRA2241 putative ABC transporter, membrane-spanning permease.
 
 
 0.984
ADD67731.1
KEGG: similar to GA12617-PA; TIGRFAM: conserved hypothetical protein; PFAM: Conserved hypothetical CHP02185 integral membrane family protein.
 
     0.947
ADD67734.1
KEGG: dde:Dde_1602 ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
   
0.918
ADD67735.1
KEGG: pmr:PMI2604 siderophore ABC transporter, ATP- binding/permease protein; PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase.
   
0.892
ADD67730.1
KEGG: cha:CHAB381_0626 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
 
     0.884
ADD67587.1
PFAM: ABC-2 type transporter; KEGG: dal:Dalk_2026 ABC-2 type transporter.
 
    0.823
ADD67586.1
PFAM: ABC-2 type transporter; KEGG: dal:Dalk_2027 ABC-2 type transporter.
 
    0.812
ADD67106.1
KEGG: sfu:Sfum_1102 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein.
  
 0.810
ADD68342.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_2401 nickel transporter permease NikB.
  
 
 0.783
ADD69267.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_1533 binding-protein-dependent transport systems inner membrane component.
  
 
 0.783
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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