Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADD67608.1 | ADD67744.1 | Dacet_0828 | Dacet_0966 | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dat:HRM2_00050 ExbD. | PFAM: MotA/TolQ/ExbB proton channel; KEGG: dat:HRM2_00070 TolQ3. | 0.920 |
ADD67608.1 | ADD67745.1 | Dacet_0828 | Dacet_0967 | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dat:HRM2_00050 ExbD. | PFAM: MotA/TolQ/ExbB proton channel; KEGG: dat:HRM2_00060 TolQ2. | 0.909 |
ADD67608.1 | ADD67747.1 | Dacet_0828 | Dacet_0969 | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dat:HRM2_00050 ExbD. | KEGG: dps:DP2971 TonB protein; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein. | 0.708 |
ADD67608.1 | ADD68374.1 | Dacet_0828 | Dacet_1608 | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dat:HRM2_00050 ExbD. | TonB family protein; KEGG: dde:Dde_2156 TonB-like; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein. | 0.753 |
ADD67739.1 | ADD67741.1 | Dacet_0961 | Dacet_0963 | PFAM: TonB-dependent receptor plug; KEGG: pca:Pcar_1947 hypothetical protein. | KEGG: abu:Abu_1852 hypothetical protein. | 0.779 |
ADD67739.1 | ADD67743.1 | Dacet_0961 | Dacet_0965 | PFAM: TonB-dependent receptor plug; KEGG: pca:Pcar_1947 hypothetical protein. | KEGG: dal:Dalk_3524 hypothetical protein. | 0.773 |
ADD67739.1 | ADD67744.1 | Dacet_0961 | Dacet_0966 | PFAM: TonB-dependent receptor plug; KEGG: pca:Pcar_1947 hypothetical protein. | PFAM: MotA/TolQ/ExbB proton channel; KEGG: dat:HRM2_00070 TolQ3. | 0.822 |
ADD67739.1 | ADD67745.1 | Dacet_0961 | Dacet_0967 | PFAM: TonB-dependent receptor plug; KEGG: pca:Pcar_1947 hypothetical protein. | PFAM: MotA/TolQ/ExbB proton channel; KEGG: dat:HRM2_00060 TolQ2. | 0.822 |
ADD67739.1 | ADD67746.1 | Dacet_0961 | Dacet_0968 | PFAM: TonB-dependent receptor plug; KEGG: pca:Pcar_1947 hypothetical protein. | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pha:PSHAb0523 putative TonB system-dependent transport protein. | 0.842 |
ADD67739.1 | ADD67747.1 | Dacet_0961 | Dacet_0969 | PFAM: TonB-dependent receptor plug; KEGG: pca:Pcar_1947 hypothetical protein. | KEGG: dps:DP2971 TonB protein; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein. | 0.906 |
ADD67739.1 | ADD68374.1 | Dacet_0961 | Dacet_1608 | PFAM: TonB-dependent receptor plug; KEGG: pca:Pcar_1947 hypothetical protein. | TonB family protein; KEGG: dde:Dde_2156 TonB-like; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein. | 0.604 |
ADD67741.1 | ADD67739.1 | Dacet_0963 | Dacet_0961 | KEGG: abu:Abu_1852 hypothetical protein. | PFAM: TonB-dependent receptor plug; KEGG: pca:Pcar_1947 hypothetical protein. | 0.779 |
ADD67741.1 | ADD67743.1 | Dacet_0963 | Dacet_0965 | KEGG: abu:Abu_1852 hypothetical protein. | KEGG: dal:Dalk_3524 hypothetical protein. | 0.773 |
ADD67741.1 | ADD67744.1 | Dacet_0963 | Dacet_0966 | KEGG: abu:Abu_1852 hypothetical protein. | PFAM: MotA/TolQ/ExbB proton channel; KEGG: dat:HRM2_00070 TolQ3. | 0.778 |
ADD67741.1 | ADD67745.1 | Dacet_0963 | Dacet_0967 | KEGG: abu:Abu_1852 hypothetical protein. | PFAM: MotA/TolQ/ExbB proton channel; KEGG: dat:HRM2_00060 TolQ2. | 0.778 |
ADD67741.1 | ADD67746.1 | Dacet_0963 | Dacet_0968 | KEGG: abu:Abu_1852 hypothetical protein. | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pha:PSHAb0523 putative TonB system-dependent transport protein. | 0.777 |
ADD67741.1 | ADD67747.1 | Dacet_0963 | Dacet_0969 | KEGG: abu:Abu_1852 hypothetical protein. | KEGG: dps:DP2971 TonB protein; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein. | 0.773 |
ADD67743.1 | ADD67739.1 | Dacet_0965 | Dacet_0961 | KEGG: dal:Dalk_3524 hypothetical protein. | PFAM: TonB-dependent receptor plug; KEGG: pca:Pcar_1947 hypothetical protein. | 0.773 |
ADD67743.1 | ADD67741.1 | Dacet_0965 | Dacet_0963 | KEGG: dal:Dalk_3524 hypothetical protein. | KEGG: abu:Abu_1852 hypothetical protein. | 0.773 |
ADD67743.1 | ADD67744.1 | Dacet_0965 | Dacet_0966 | KEGG: dal:Dalk_3524 hypothetical protein. | PFAM: MotA/TolQ/ExbB proton channel; KEGG: dat:HRM2_00070 TolQ3. | 0.939 |
page 1 of 4