Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67750.1PFAM: extracellular solute-binding protein family 5; KEGG: maq:Maqu_1538 extracellular solute-binding protein. (603 aa)    
Predicted Functional Partners:
ADD67751.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vcj:VCD_000727 oligopeptide transport system permease protein OppB.
  
 0.976
ADD67752.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_3304 ABC transporter permease.
 
  
 0.961
ADD67753.1
KEGG: csa:Csal_3002 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.944
ADD68342.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_2401 nickel transporter permease NikB.
  
 
 0.873
ADD69267.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_1533 binding-protein-dependent transport systems inner membrane component.
  
 
 0.873
ADD69731.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: glo:Glov_2033 binding-protein-dependent transport systems inner membrane component.
  
 
 0.873
ADD67742.1
KEGG: dvl:Dvul_0847 hypothetical protein.
  
    0.808
ADD67741.1
KEGG: abu:Abu_1852 hypothetical protein.
  
    0.781
ADD67746.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pha:PSHAb0523 putative TonB system-dependent transport protein.
  
    0.777
ADD67739.1
PFAM: TonB-dependent receptor plug; KEGG: pca:Pcar_1947 hypothetical protein.
     
 0.775
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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