Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
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[Homology]
Score
ADD67757.1KEGG: dal:Dalk_3690 glycoside hydrolase family 13 domain protein. (104 aa)    
Predicted Functional Partners:
ADD67756.1
KEGG: dat:HRM2_02200 hypothetical protein.
       0.799
ADD67758.1
KEGG: dat:HRM2_02180 hypothetical 5-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb).
       0.791
ADD67759.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: dat:HRM2_02190 predicted RNA polymerase ECF- type sigma factor(extracytoplasmic function); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein.
       0.788
ADD67760.1
KEGG: rlt:Rleg2_1388 hypothetical protein.
       0.639
ADD67754.1
KEGG: hha:Hhal_2268 heat shock protein DnaJ domain- containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein.
       0.605
ADD67755.1
KEGG: gem:GM21_0928 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.605
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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