Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67758.1KEGG: dat:HRM2_02180 hypothetical 5-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb). (187 aa)    
Predicted Functional Partners:
ADD68125.1
TIGRFAM: alpha-glucan phosphorylase; KEGG: gsu:GSU0371 carbohydrate phosphorylase family protein; PFAM: glycosyl transferase family 35.
  
 
 0.940
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
  
 0.859
glgA-2
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
  
 0.859
ADD67759.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: dat:HRM2_02190 predicted RNA polymerase ECF- type sigma factor(extracytoplasmic function); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein.
 
   
 0.856
ADD69693.1
KEGG: tgr:Tgr7_0708 sucrose-phosphate synthase; TIGRFAM: sucrose-phosphate synthase; HAD- superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; glycosyl transferase group 1; Haloacid dehalogenase domain protein hydrolase type 3.
 
 0.814
ADD67756.1
KEGG: dat:HRM2_02200 hypothetical protein.
       0.791
ADD67757.1
KEGG: dal:Dalk_3690 glycoside hydrolase family 13 domain protein.
       0.791
ADD69721.1
PFAM: glycosyl transferase group 1; KEGG: dat:HRM2_01820 putative glycosyl transferase, group 1 family protein.
  
 0.684
ADD66812.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: sfu:Sfum_3186 hypothetical protein.
  
     0.639
ADD67760.1
KEGG: rlt:Rleg2_1388 hypothetical protein.
       0.639
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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