Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADD67764.1PFAM: periplasmic binding protein; KEGG: dds:Ddes_0991 periplasmic binding protein. (360 aa)    
Predicted Functional Partners:
ADD67762.1
KEGG: dds:Ddes_0989 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.980
ADD67763.1
PFAM: transport system permease protein; KEGG: dds:Ddes_0990 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.965
ADD67700.1
KEGG: dds:Ddes_0989 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.916
ADD67699.1
PFAM: transport system permease protein; KEGG: dds:Ddes_0990 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.853
ADD67765.1
PFAM: Methyltransferase type 11; KEGG: dds:Ddes_0992 methyltransferase type 11.
 
     0.840
ADD67766.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dds:Ddes_0993 TonB-dependent receptor.
  
  
 0.785
ADD66973.1
KEGG: bov:BOV_1302 iron compound ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.737
ADD67599.1
KEGG: spe:Spro_3426 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.725
ADD66972.1
PFAM: transport system permease protein; KEGG: sfu:Sfum_2134 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.671
ADD67600.1
PFAM: transport system permease protein; KEGG: pol:Bpro_4778 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.671
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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