STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67787.1PFAM: protein of unknown function UPF0153; KEGG: gme:Gmet_2609 hypothetical protein. (211 aa)    
Predicted Functional Partners:
ADD67785.1
KEGG: dde:Dde_1822 uncharacterized protein SCO1/SenC/PrrC.
 
     0.750
ADD67782.1
TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: dde:Dde_1825 Caa(3)-type oxidase, subunit IV.
 
     0.731
ADD67088.1
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
   
   0.701
ADD67781.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
     0.674
ADD67783.1
PFAM: cytochrome c oxidase subunit III; KEGG: dde:Dde_1824 cytochrome c oxidase, subunit III.
 
     0.625
ADD67780.1
PFAM: UbiA prenyltransferase; KEGG: dde:Dde_1827 protoheme IX farnesyltransferase, putative.
 
     0.605
ADD67784.1
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
     0.596
ADD69117.1
KEGG: gur:Gura_0893 putative PTS IIA-like nitrogen- regulatory protein PtsN; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; Prophage CP4-57 regulatory.
  
     0.577
ADD68816.1
PFAM: Radical SAM domain protein; KEGG: pca:Pcar_1369 hypothetical protein.
  
     0.565
ADD67788.1
KEGG: glo:Glov_1117 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
       0.554
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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