Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67790.1KEGG: dde:Dde_0300 hypothetical protein. (545 aa)    
Predicted Functional Partners:
napA
Molybdopterin oxidoreductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
  0.938
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.912
ADD68830.1
KEGG: glo:Glov_2655 respiratory nitrate reductase, gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit.
     
 0.904
ADD68832.1
KEGG: ajs:Ajs_0437 respiratory nitrate reductase beta subunit; TIGRFAM: nitrate reductase, beta subunit.
     
 0.904
ADD68833.1
KEGG: glo:Glov_2652 nitrate reductase, alpha subunit; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.904
ADD68835.1
PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_1953 nitrate/nitrite transporter.
     
 0.904
ADD69155.1
EriC2; KEGG: dat:HRM2_22170 EriC2.
  
     0.586
ADD67791.1
Hypothetical protein.
       0.583
ADD67648.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dps:DP0873 hypothetical protein.
 
 
 0.531
ADD67788.1
KEGG: glo:Glov_1117 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
       0.512
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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