STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67843.1KEGG: dvm:DvMF_1429 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR. (145 aa)    
Predicted Functional Partners:
ADD67842.1
PFAM: major facilitator superfamily MFS_1; KEGG: dat:HRM2_48900 putative major facilitator superfamily protein.
 
   
 0.818
ADD67841.1
PFAM: Cupin 2 conserved barrel domain protein.
  
    0.779
ADD68108.1
KEGG: hch:HCH_06801 transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
     0.544
ADD67844.1
PFAM: Aldehyde Dehydrogenase; KEGG: ara:Arad_7566 aldehyde dehydrogenase protein.
     
 0.425
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.