Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67863.1ABC-type phosphate/phosphonate transport system periplasmic component-like protein; KEGG: xac:XAC2383 phosphate-binding protein. (284 aa)    
Predicted Functional Partners:
ADD67864.1
PFAM: CoA-binding domain protein; KEGG: tbd:Tbd_2525 hypothetical protein.
       0.773
ADD67865.1
KEGG: ccv:CCV52592_0104 flagellar basal body rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein.
       0.499
ADD69330.1
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: gur:Gura_2753 phosphonate ABC transporter, periplasmic phosphonate-binding protein.
  
     0.434
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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