STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67893.1KEGG: abc:ACICU_00082 hypothetical protein. (457 aa)    
Predicted Functional Partners:
ADD67892.1
Hypothetical protein.
       0.773
ADD67869.1
KEGG: pca:Pcar_2763 hypothetical protein.
  
     0.697
ADD67569.1
KEGG: gbm:Gbem_1124 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
  
     0.695
ADD67611.1
TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: dal:Dalk_0572 PAS/PAC sensor hybrid histidine kinase; SMART: PAS domain containing protein.
  
     0.671
ADD69473.1
Hypothetical protein; KEGG: dvl:Dvul_1151 heat repeat-containing PBS lyase.
  
     0.669
ADD69523.1
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: pub:SAR11_1160 phosphomannomutase.
  
     0.669
ADD68853.1
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: nis:NIS_0011 transcriptional regulator.
  
     0.661
ADD69609.1
KEGG: geo:Geob_2165 PBS lyase heat domain protein repeat-containing protein; PFAM: PBS lyase HEAT domain protein repeat- containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein.
  
     0.656
ADD68417.1
PFAM: outer membrane porin; KEGG: spc:Sputcn32_3385 outer membrane porin.
  
     0.640
ADD69011.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ypy:YPK_0218 hypothetical protein.
  
     0.639
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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