STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67968.1PFAM: Radical SAM domain protein; KEGG: dol:Dole_2431 radical SAM domain-containing protein. (327 aa)    
Predicted Functional Partners:
ADD68604.1
PFAM: protein of unknown function DUF52; KEGG: afw:Anae109_1268 hypothetical protein; Belongs to the MEMO1 family.
     0.975
ADD68758.1
PFAM: AMMECR1 domain protein; KEGG: geo:Geob_3548 AMMECR1 domain protein.
     0.972
ADD67966.1
KEGG: mmb:Mmol_2266 hypothetical protein.
  
    0.828
ADD67964.1
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
     
 0.823
ADD67965.1
Membrane protein-like protein; KEGG: tmz:Tmz1t_0773 heptaprenyl diphosphate synthase component I.
       0.820
ADD67967.1
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.820
ADD67969.1
Trans-hexaprenyltranstransferase; KEGG: gem:GM21_3477 trans- hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.820
ADD67963.1
PFAM: AMP-dependent synthetase and ligase; KEGG: nam:NAMH_1365 long-chain-fatty-acid--CoA ligase.
  
    0.816
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
       0.777
ADD68285.1
KEGG: gbm:Gbem_2499 pyruvate formate-lyase PFL; PFAM: pyruvate formate-lyase PFL; formate C- acetyltransferase glycine radical.
  
  
 0.661
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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