STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67979.1KEGG: nam:NAMH_0979 putative lipoprotein. (192 aa)    
Predicted Functional Partners:
ADD67981.1
PFAM: Lytic transglycosylase catalytic; KEGG: dol:Dole_2185 lytic transglycosylase catalytic.
 
     0.869
ADD68524.1
KEGG: tdn:Suden_0734 hypothetical protein.
 
     0.787
ADD67980.1
KEGG: wsu:WS1151 hypothetical protein.
       0.650
ADD67039.1
KEGG: dol:Dole_0797 hypothetical protein.
  
     0.646
ADD67038.1
Hypothetical protein; KEGG: hch:HCH_00750 chromosome segregation ATPase.
  
     0.583
ADD67786.1
PFAM: cytochrome c class I; KEGG: dvm:DvMF_0538 cytochrome c class I.
  
     0.574
ADD67982.1
KEGG: tdn:Suden_0394 hypothetical protein.
       0.564
ADD69298.1
Protein serine/threonine phosphatase; KEGG: tdn:Suden_0208 response regulator receiver domain-containing protein; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein.
  
     0.556
ADD68320.1
Hypothetical protein; KEGG: abu:Abu_0526 methyl-accepting chemotaxis protein.
  
     0.554
ADD67978.1
Hypothetical protein.
       0.541
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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